STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1950Cation-transporting ATPase; ORF_ID:slr1950; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. (780 aa)    
Predicted Functional Partners:
ssr2857
ORF_ID:ssr2857; unknown protein.
  
 
 0.953
slr1507
ORF_ID:slr1507; unknown protein.
   
  
 0.813
sll0240
ABC transporter; ORF_ID:sll0240.
   
  
 0.812
sll0790
Sensory transduction histidine kinase; ORF_ID:sll0790.
   
  
 0.682
sll0789
OmpR subfamily; ORF_ID:sll0789.
      
 0.677
sll0615
Transmembrane protein FT27; ORF_ID:sll0615.
      
 0.649
slr1257
ORF_ID:slr1257; unknown protein.
      
 0.623
slr1595
Na/H antiporter; Na(+)/H(+) antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.550
napA
Na(+)/H(+) antiporter; Na(+)/H(+) antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.470
nifJ
Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
  
 0.438
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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