STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1951ORF_ID:slr1951; unknown protein. (157 aa)    
Predicted Functional Partners:
slr1957
ORF_ID:slr1957; unknown protein.
  
    0.758
sll1219
ORF_ID:sll1219; unknown protein.
  
     0.696
ssr2806
ORF_ID:ssr2806; unknown protein.
  
     0.684
odhB
Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex; ORF_ID:sll1841; gene:odhB or citM.
   
 
 0.683
ssr1562
ORF_ID:ssr1562; unknown protein.
  
     0.675
sll1949
ORF_ID:sll1949; unknown protein.
  
     0.667
slr0989
Probable transcriptional regulatory protein slr0989; ORF_ID:slr0989; hypothetical protein.
       0.664
sll1350
ORF_ID:sll1350; unknown protein.
  
    0.662
sll1573
ORF_ID:sll1573; unknown protein.
  
     0.641
slr1275
ORF_ID:slr1275; unknown protein.
  
     0.638
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.