STRINGSTRING
slr0324 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0324" - Probable oligopeptide ABC transporter permease protein in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0324Probable oligopeptide ABC transporter permease protein (294 aa)    
Predicted Functional Partners:
sll0312
OppB in a binding protein-dependent transportsystem (337 aa)
  0.977
sll1768
Probable oligopeptide ABC transporter permease protein (326 aa)
  0.973
sll1927
ABC transporter (650 aa)
 
  0.961
slr1740
Extracellular solute-binding protein (582 aa)
 
  0.956
sll1699
Extracellular solute-binding protein (631 aa)
 
  0.956
ams1
Alpha-mannosidase (1042 aa)
              0.859
slr0322
CheA-like protein PilL/TaxAY3/Hik43 (1095 aa)
              0.859
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (315 aa)
         
  0.848
slr0325
Hypothetical protein (161 aa)
              0.697
nifJ
Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1199 aa)
         
  0.468
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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