STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0328Low molecular weight phosphotyrosine protein phosphatase; ORF_ID:slr0328. (157 aa)    
Predicted Functional Partners:
slr0326
ORF_ID:slr0326; unknown protein.
     
 0.904
kpsT
Polysialic acid transport ATP-binding protein; ORF_ID:slr2108.
      
 0.898
kpsM
Polysialic acid transport protein; ORF_ID:slr2107.
      
 0.895
slr1563
Probable ketoamine kinase slr1563; Ketoamine kinase that phosphorylates ketoamines on the third carbon of the sugar moiety to generate ketoamine 3-phosphate.
     0.848
rfbA-2
Integral membrane O-antigen translocator protein; ORF_ID:sll0574.
      
 0.829
slr0977
ABC transporter; ORF_ID:slr0977.
      
 0.821
slr1299
UDP-glucose dehydrogenase; ORF_ID:slr1299.
     
 0.810
sll0982
ORF_ID:sll0982; unknown protein.
      
 0.780
sll1033
ORF_ID:sll1033; unknown protein.
   
 
 0.755
phr
DNA photolyase; May have a photoreceptor function. Binds DNA; represses transcription of at least 8 genes, including slr0364 and slr1866. Does not encode a DNA photolyase function. Its disruption does not affect circadian rhythm.
 
  
   0.703
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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