STRINGSTRING
ssl0564 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ssl0564" - Response regulator OpmR-like protein PedR in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssl0564Response regulator OpmR-like protein PedR (89 aa)    
Predicted Functional Partners:
sll0296
Hypothetical protein (186 aa)
         
  0.920
sll0782
Putative protein kinase (369 aa)
   
  0.895
sll1544
Response regulator like protein Rre40 (228 aa)
   
  0.813
slr1957
Hypothetical protein (106 aa)
           
  0.759
slr1245
Transcriptional regulator (302 aa)
           
  0.728
slr1871
Transcriptional regulator (295 aa)
           
  0.713
SYNGTS_2028
No annotation available (164 aa)
           
  0.712
slr1705
Aspartoacylase, ASP (288 aa)
           
  0.712
slr1870
Hypothetical protein (249 aa)
           
  0.692
slr0701
Mercuric resistance operon regulatory protein MerR (137 aa)
           
  0.688
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (12%) [HD]