STRINGSTRING
slr0169 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0169" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0169Hypothetical protein (213 aa)    
Predicted Functional Partners:
slr0376
Hypothetical protein (116 aa)
   
          0.668
ycf35
Conserved hypothetical protein Ycf35 (128 aa)
   
          0.651
ccmK2
Carbon dioxide concentrating mechanism protein CcmK; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (103 aa)
 
          0.620
ccmK1
Carbon dioxide concentrating mechanism protein CcmK; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (111 aa)
 
          0.583
slr0436
Carbon dioxide concentrating mechanism protein CcmK (297 aa)
 
          0.572
sll1340
Hypothetical protein (100 aa)
   
          0.542
ssl0105
Hypothetical protein (88 aa)
   
          0.507
slr0168
Hypothetical protein (643 aa)
              0.501
ycf37
Photosystem I assembly protein Ycf37 (175 aa)
              0.480
slr1122
Hypothetical protein (250 aa)
   
          0.471
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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