STRINGSTRING
sll0163 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0163" - Beta transducin-like protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0163Beta transducin-like protein (1693 aa)    
Predicted Functional Partners:
sll0167
Hypothetical protein (164 aa)
         
  0.974
sll0162
Hypothetical protein (194 aa)
           
  0.933
sll0914
Hypothetical protein (376 aa)
           
  0.920
slr0439
Hypothetical protein (501 aa)
 
    0.899
hemD
uroporphyrin-III synthase (538 aa)
   
        0.861
sll1672
Hybrid sensory kinase Hik12 (834 aa)
   
   
  0.850
slr1261
Hypothetical protein (179 aa)
         
  0.848
slr0864
ABC transporter (574 aa)
     
   
  0.843
slr1149
ABC transporter (601 aa)
     
   
  0.829
sll1673
Regulatory component of sensory transduction system Rre2 (452 aa)
           
  0.828
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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