STRINGSTRING
glgB protein (Synechocystis sp. PCC6803) - STRING interaction network
"glgB" - 1,4-alpha-glucan branching enzyme in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (770 aa)    
Predicted Functional Partners:
glgA1
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose (477 aa)
 
  0.999
glgA2
Glycogen (starch) synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose (491 aa)
 
  0.999
sll1356
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity) (849 aa)
 
  0.999
SYNGTS_1012
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (855 aa)
 
  0.998
glgC
Glucose-1-phosphate adenylyltransferase; Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans (439 aa)
 
 
  0.994
malQ
4-alpha-glucanotransferase (505 aa)
 
 
  0.963
nplT
Neopullulanase (508 aa)
   
 
  0.956
SYNGTS_0122
Glycogen operon protein GlgX (746 aa)
 
 
0.942
SYNGTS_1078
Glycogen operon protein GlgX (707 aa)
 
 
0.940
trxA
Thioredoxin; Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (107 aa)
   
 
  0.881
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (11%) [HD]