STRINGSTRING
slr0386 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0386" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0386Hypothetical protein (412 aa)    
Predicted Functional Partners:
slr0345
Hypothetical protein (135 aa)
 
          0.782
sll1528
Hypothetical protein (996 aa)
   
          0.777
sll1530
Hypothetical protein (386 aa)
   
          0.771
sll1527
Hypothetical protein (1168 aa)
   
          0.761
sll0641
Hypothetical protein (509 aa)
   
          0.729
sll1456
Hypothetical protein (302 aa)
   
          0.716
slr0924
Hypothetical protein (286 aa)
   
          0.671
sll0068
Hypothetical protein (1239 aa)
   
          0.632
sll1178
Nodulation protein (615 aa)
 
          0.629
sll1424
Hypothetical protein (491 aa)
   
          0.623
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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