STRINGSTRING
gtr protein (Synechocystis sp. PCC6803) - STRING interaction network
"gtr" - Glucose transport protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtrGlucose transport protein (468 aa)    
Predicted Functional Partners:
glk
Glucokinase (355 aa)
         
  0.855
abfB
Similar to alpha-L-arabinofuranosidase B (177 aa)
           
  0.824
aqpZ
Water channel protein aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (247 aa)
       
 
  0.745
sll1499
Ferredoxin-dependent glutamate synthase (1556 aa)
       
 
  0.675
gltB
Ferredoxin-dependent glutamate synthase (1550 aa)
       
 
  0.675
slr0615
ABC transporter (580 aa)
     
  0.659
sll1276
ABC transporter (534 aa)
     
  0.659
sll1725
ABC transporter (610 aa)
     
  0.659
slr1149
ABC transporter (601 aa)
     
  0.659
slr2019
ABC transporter (593 aa)
     
  0.659
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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