STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcPGlucose transport protein; ORF_ID:sll0771. (468 aa)    
Predicted Functional Partners:
sll0772
ORF_ID:sll0772; unknown protein; Belongs to the OprB family.
  
  
 0.752
sll0822
ORF_ID:sll0822; unknown protein.
      
 0.544
bhy
B-carotene hydroxylase; ORF_ID:sll1468.
      
 0.542
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; ORF_ID:sll1561; Belongs to the aldehyde dehydrogenase family.
  
 
 0.478
secD
Protein-export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
   
   0.422
slr1853
ORF_ID:slr1853; unknown protein.
  
    0.418
slr0700
ORF_ID:slr0700; unknown protein.
  
 
 0.411
sll1087
Sodium-coupled permease; ORF_ID:sll1087; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
 
 0.403
ggt
Gamma-glutamyltranspeptidase; ORF_ID:slr1269; Belongs to the gamma-glutamyltransferase family.
   
 
 0.402
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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