STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sarASensory transduction histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. (383 aa)    
Predicted Functional Partners:
slr0115
OmpR subfamily; ORF_ID:slr0115.
 
  0.991
slr1909
NarL subfamily; ORF_ID:slr1909.
 
 
   0.951
slr1042
CheY subfamily; ORF_ID:slr1042.
 
   0.916
kdpD
Potassium-transporting ATPase D chain; Member of the two-component regulatory system KdpD/KdpE involved in the regulation of the kdp operon. KdpD may function as a membrane-associated protein kinase that phosphorylates KdpE in response to environmental signals (By similarity).
 
      0.900
slr1142
ORF_ID:slr1142; unknown protein.
 
      0.899
sll1555
Hybrid sensory kinase; ORF_ID:sll1555.
 
   0.879
slr1982
CheY subfamily; ORF_ID:slr1982.
 
   0.859
sll1330
OmpR subfamily; ORF_ID:sll1330.
 
 
 0.838
slr0947
OmpR subfamily; ORF_ID:slr0947.
 
   0.830
sll1595
ORF_ID:sll1595; hypothetical protein; Belongs to the KaiC family.
    
 
 0.827
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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