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rpsU protein (Synechocystis sp. PCC6803) - STRING interaction network
"rpsU" - 30S ribosomal protein S21 in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
rpsU30S ribosomal protein S21 (60 aa)    
Predicted Functional Partners:
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (97 aa)
   
  0.984
rpsP
30S ribosomal protein S16 (82 aa)
   
  0.978
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (71 aa)
   
  0.964
rpsO
30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA (89 aa)
     
  0.958
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (113 aa)
   
  0.954
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (173 aa)
     
  0.951
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy (126 aa)
     
  0.949
rps5
30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy (173 aa)
   
  0.947
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (105 aa)
     
  0.946
rpsI
30S ribosomal protein S9 (137 aa)
     
  0.945
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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