STRINGSTRING
slr0007 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0007" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0007Hypothetical protein (253 aa)    
Predicted Functional Partners:
SYNGTS_2586
Imidazoleglycerol-phosphate dehydratase (161 aa)
 
    0.994
sll1528
Hypothetical protein (996 aa)
 
  0.930
sll0576
Putative sugar-nucleotide epimerase/dehydratase (312 aa)
 
 
  0.919
sps
Sucrose phosphate synthase (720 aa)
   
  0.898
SYNGTS_2019
dTDP-4-dehydrorhamnose 3,5-epimerase (182 aa)
   
  0.847
SYNGTS_0327
dTDP-6-deoxy-L-mannose-dehydrogenase (189 aa)
   
  0.847
lmbP
LmbP protein (326 aa)
 
        0.845
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
 
 
0.834
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (194 aa)
        0.832
slr0583
Hypothetical protein (310 aa)
   
 
  0.821
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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