STRINGSTRING
fumC protein (Synechocystis sp. PCC6803) - STRING interaction network
"fumC" - Fumarase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fumCFumarase; Catalyzes the reversible addition of water to fumarate to give L-malate (466 aa)    
Predicted Functional Partners:
mdh
2-ketoacid dehydrogenase using malate or lactate as substrate; Catalyzes the reversible oxidation of malate to oxaloacetate (324 aa)
   
  0.994
frdA
Succinate dehydrogenase flavoprotein subunit (575 aa)
   
  0.994
SYNGTS_1195
Succinate dehydrogenase iron-sulphur protein subunit (331 aa)
   
 
  0.992
SYNGTS_2571
Succinate dehydrogenase iron-sulfur protein (245 aa)
   
 
  0.989
me
Malic enzyme (463 aa)
   
 
  0.979
hdrB
Heterodisulfide reductase subunit B (301 aa)
       
  0.963
gltA
Citrate synthase (397 aa)
   
 
  0.951
sll0402
Aspartate aminotransferase (389 aa)
     
 
  0.931
gabD
Succinate-semialdehyde dehydrogenase (NADP+); Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate (454 aa)
     
  0.869
sucD
succinyl-CoA synthetase (302 aa)
   
   
  0.853
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (8%) [HD]