STRINGSTRING
slr0019 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0019" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0019Hypothetical protein (892 aa)    
Predicted Functional Partners:
slr1668
Hypothetical protein (280 aa)
 
 
  0.987
slr0845
Hypothetical protein (190 aa)
           
  0.940
gltB
Ferredoxin-dependent glutamate synthase (1550 aa)
           
  0.825
sll1499
Ferredoxin-dependent glutamate synthase (1556 aa)
           
  0.819
slr1667
Hypothetical protein (178 aa)
           
  0.753
spkA
Serine/threonine protein kinase; Protein kinase that regulates cellular motility via phosphorylation of membrane proteins (416 aa)
           
  0.750
gspF
Pilin biogenesis protein (404 aa)
     
   
  0.635
SYNGTS_1993
Twitching motility protein (369 aa)
           
  0.629
SYNGTS_1869
Twitching mobility protein (428 aa)
           
  0.539
slr1608
Glucose dehydrogenase-B (412 aa)
   
        0.460
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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