STRINGSTRING
slr0217 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0217" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0217Hypothetical protein (140 aa)    
Predicted Functional Partners:
slr0975
Hypothetical protein (285 aa)
   
          0.778
ssl1498
Hypothetical protein (61 aa)
   
          0.777
sll0763
ORF_ID-sll0762 (224 aa)
   
          0.776
slr1970
Hypothetical protein (173 aa)
   
          0.776
ssl0788
Hypothetical protein (97 aa)
   
          0.775
ssl2717
Hypothetical protein (70 aa)
   
          0.775
cpcD
Phycocyanin associated linker protein; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer (83 aa)
   
          0.772
ssl1918
Hypothetical protein (97 aa)
   
          0.772
sll1372
Hypothetical protein (275 aa)
   
          0.771
sll1949
Hypothetical protein (247 aa)
   
          0.769
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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