STRINGSTRING
sll0200 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0200" - Transposase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0200Transposase (119 aa)    
Predicted Functional Partners:
ssr1176
Transposase (97 aa)
 
     
  0.930
slr0302
PleD gene product homolog (768 aa)
           
  0.920
sll1895
Hypothetical protein (696 aa)
           
  0.920
slr0322
CheA-like protein PilL/TaxAY3/Hik43 (1095 aa)
           
  0.895
sll0201
Transposase (164 aa)
          0.877
slr0798
Zinc-transporting P-type ATPase (721 aa)
           
  0.716
sll1574
Hypothetical protein (103 aa)
           
  0.715
slr0149
Hypothetical protein (156 aa)
           
  0.712
slr0146
Hypothetical protein (170 aa)
           
  0.712
slr0145
Hypothetical protein (136 aa)
           
  0.712
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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