STRINGSTRING
sll0406 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0406" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0406Hypothetical protein (161 aa)    
Predicted Functional Partners:
ssr1114
Hypothetical protein (86 aa)
           
  0.940
SYNGTS_2367
Probable transcription regulator (133 aa)
           
  0.940
SYNGTS_0436
Virulence associated protein C (83 aa)
           
  0.940
slr0664
Hypothetical protein (120 aa)
           
  0.920
sll0405
Hypothetical protein (261 aa)
     
      0.888
SYNGTS_1993
Twitching motility protein (369 aa)
           
  0.664
SYNGTS_1869
Twitching mobility protein (428 aa)
           
  0.628
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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