STRINGSTRING
slr0438 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0438" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0438Hypothetical protein (107 aa)    
Predicted Functional Partners:
sll2013
Hypothetical protein (195 aa)
   
          0.775
slr0731
Hypothetical protein (402 aa)
   
          0.772
slr1949
Hypothetical protein (212 aa)
   
          0.766
ssl1918
Hypothetical protein (97 aa)
   
          0.762
sll0272
Hypothetical protein (157 aa)
   
          0.761
slr0483
Hypothetical protein (149 aa)
   
          0.758
ndhL
NADH dehydrogenase subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity). Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration (80 aa)
   
          0.758
ssl0788
Hypothetical protein (97 aa)
   
          0.757
slr0962
Hypothetical protein (477 aa)
   
          0.757
sll1656
Hypothetical protein (191 aa)
   
          0.749
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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