STRINGSTRING
ssr0109 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ssr0109" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssr0109Hypothetical protein (62 aa)    
Predicted Functional Partners:
ybeY
Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (179 aa)
              0.875
sll1925
Hypothetical protein (238 aa)
   
          0.770
slr1946
Hypothetical protein (261 aa)
   
          0.767
sll1926
Hypothetical protein (145 aa)
   
          0.767
slr0250
Hypothetical protein (178 aa)
   
          0.760
slr1353
Hypothetical protein (291 aa)
   
          0.754
sll0827
Hypothetical protein (496 aa)
   
          0.749
rpmC
50S ribosomal protein L29 (73 aa)
   
          0.737
slr0816
Hypothetical protein (167 aa)
   
          0.735
slr1800
Hypothetical protein (355 aa)
   
          0.732
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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