STRINGSTRING
slr0060 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0060" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0060Hypothetical protein (369 aa)    
Predicted Functional Partners:
slr1829
Hypothetical protein (330 aa)
   
          0.777
phbC
Poly(3-hydroxyalkanoate) synthase (378 aa)
   
          0.708
slr0059
Hypothetical protein (101 aa)
              0.634
sll1119
Hypothetical protein (361 aa)
 
          0.622
sll1685
Heme-binding proton extrusion protein PcxA; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake (By similarity) (393 aa)
   
          0.619
slr1959
Hypothetical protein (827 aa)
   
   
  0.606
fabG2
3-ketoacyl-acyl carrier protein reductase (240 aa)
 
          0.594
sll1477
Hypothetical protein (832 aa)
   
          0.566
sll0752
Hypothetical protein (452 aa)
   
          0.553
slr1900
Hypothetical protein (247 aa)
   
          0.542
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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