STRINGSTRING
slr0479 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0479" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0479Hypothetical protein (240 aa)    
Predicted Functional Partners:
slr0483
Hypothetical protein (149 aa)
 
          0.898
sll1121
Hypothetical protein (770 aa)
 
          0.862
sll1516
Hypothetical protein (624 aa)
 
          0.862
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate (217 aa)
              0.859
ycf46
Hypothetical protein (499 aa)
              0.840
slr0484
Sensory transduction histidine kinase Hik26 (675 aa)
 
          0.833
ssl1918
Hypothetical protein (97 aa)
   
          0.777
ssl0788
Hypothetical protein (97 aa)
   
          0.776
sll1350
Hypothetical protein (398 aa)
   
          0.775
sll0413
Hypothetical protein (207 aa)
   
          0.772
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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