STRINGSTRING
slr0484 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0484" - Sensory transduction histidine kinase Hik26 in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0484Sensory transduction histidine kinase Hik26 (675 aa)    
Predicted Functional Partners:
slr0483
Hypothetical protein (149 aa)
 
          0.871
slr0479
Hypothetical protein (240 aa)
 
          0.833
sll1350
Hypothetical protein (398 aa)
   
          0.776
sll0984
Hypothetical protein (148 aa)
   
          0.768
slr0211
Hypothetical protein (403 aa)
   
          0.765
slr2144
Hypothetical protein (301 aa)
   
          0.764
ssl1918
Hypothetical protein (97 aa)
   
          0.764
sll1736
Hypothetical protein (127 aa)
   
          0.763
ssl0788
Hypothetical protein (97 aa)
   
          0.759
slr0397
Hypothetical protein (191 aa)
   
          0.754
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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