STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
im30Chloroplast membrane-associated 30 kD protein; ORF_ID:sll0617; Belongs to the PspA/IM30 family. (267 aa)    
Predicted Functional Partners:
sll1905
Hybrid sensory kinase; ORF_ID:sll1905.
    
 
 0.936
slr1759
Hybrid sensory kinase; ORF_ID:slr1759.
    
 
 0.931
slr1768
ORF_ID:slr1768; unknown protein.
   
  
 0.830
phb
Prohibitin; ORF_ID:slr1106.
   
  
 0.827
slr1471
Inner membrane protein; Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and independently of the Sec translocase complex (By similarity). Addition of green fluorescent protein (GFP) to the C-terminus leads to photoinhibition at 80 umol/m(2)/s light intensity, reduced amounts of pigment, altered energy transfer between the antenna systems and the reaction centers of PSI and PSII, and impaired [...]
      
 0.806
slr2104
Hybrid sensory kinase; ORF_ID:slr2104.
    
 
 0.792
slr1529
Nitrogen assimilation regulatory protein; ORF_ID:slr1529.
   
 
 0.739
slr0402
dITP/XTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
      
 0.657
slr1160
ORF_ID:slr1160; unknown protein.
      
 0.547
slr0311
Sensory transduction histidine kinase; ORF_ID:slr0311.
  
 
 0.517
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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