STRINGSTRING
sll0385 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0385" - ABC transporter in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0385ABC transporter; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity) (251 aa)    
Predicted Functional Partners:
sll0384
Hypothetical protein (257 aa)
 
  0.999
cbiM
Cobalamin biosynthesis protein M (214 aa)
 
   
  0.997
slr1978
Hypothetical protein (291 aa)
 
  0.970
sll0382
Hypothetical protein (176 aa)
 
          0.881
sll0381
Hypothetical protein (294 aa)
              0.804
sll1491
Beta transducin-like protein (348 aa)
         
  0.772
cbiH
Precorrin methylase (627 aa)
   
 
  0.757
sll1087
Sodium-coupled permease (512 aa)
           
  0.755
sphX
SphX protein precursor; May be involved in the system for phosphate transport across the cytoplasmic membrane (336 aa)
         
  0.752
cbaB
3-chlorobenzoate-3,4-dioxygenase (357 aa)
           
  0.711
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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