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cbiM protein (Synechocystis sp. PCC6803) - STRING interaction network
"cbiM" - Cobalamin biosynthesis protein M in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiMCobalamin biosynthesis protein M (214 aa)    
Predicted Functional Partners:
sll0384
Hypothetical protein (257 aa)
 
   
  0.998
sll0385
ABC transporter; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity) (251 aa)
 
   
  0.997
sll0382
Hypothetical protein (176 aa)
 
          0.961
sll0381
Hypothetical protein (294 aa)
              0.875
cbiH
Precorrin methylase (627 aa)
 
     
  0.813
cbiE
Precorrin-6y C5,15-methyltransferase (decarboxylating) (425 aa)
 
     
  0.808
slr0354
ABC transporter (210 aa)
       
  0.785
sll1623
ABC transporter (223 aa)
       
  0.785
slr1978
Hypothetical protein (291 aa)
       
  0.765
slr1467
Precorrin isomerase (208 aa)
 
     
  0.722
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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