STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0182ABC transporter; ORF_ID:sll0182. (661 aa)    
Predicted Functional Partners:
slr0369
Cation or drug efflux system protein; ORF_ID:slr0369; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
      
 0.944
ssl0410
ORF_ID:ssl0410; unknown protein.
      
 0.800
napA
Na(+)/H(+) antiporter; Na(+)/H(+) antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
      
 0.781
ycf46
Ycf46 protein; ORF_ID:slr0480; hypothetical protein.
  
  
 0.709
recA
RecA gene product; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
   0.685
slr0374
Cell division cycle protein; ORF_ID:slr0374.
     
 0.668
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; ORF_ID:sll1561; Belongs to the aldehyde dehydrogenase family.
   
 
 0.555
gabD
Succinate-semialdehyde dehydrogenase (NADP+); Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate.
     
 0.551
slr0091
Aldehyde dehydrogenase; ORF_ID:slr0091; Belongs to the aldehyde dehydrogenase family.
     
 0.551
sll0181
ORF_ID:sll0181; unknown protein.
       0.487
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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