STRINGSTRING
sll0888 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0888" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0888Hypothetical protein (190 aa)    
Predicted Functional Partners:
sll0658
Hypothetical protein (164 aa)
   
          0.742
slr1612
Hypothetical protein (286 aa)
   
          0.699
slr0976
Hypothetical protein (242 aa)
   
          0.679
slr1752
Hypothetical protein (221 aa)
   
          0.675
ssr2708
Hypothetical protein (53 aa)
   
          0.673
slr0770
Hypothetical protein (106 aa)
 
          0.658
sll0007
Hypothetical protein (191 aa)
   
          0.656
ssr1513
Hypothetical protein (65 aa)
              0.652
sll1956
Hypothetical protein (192 aa)
   
          0.643
slr1739
PsbW homolog (122 aa)
   
          0.639
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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