STRINGSTRING
ssr1513 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ssr1513" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssr1513Hypothetical protein (65 aa)    
Predicted Functional Partners:
ssr1600
Hypothetical protein (70 aa)
   
          0.723
abfB
Similar to alpha-L-arabinofuranosidase B (177 aa)
   
          0.675
sll0888
Hypothetical protein (190 aa)
              0.652
sll0909
Hypothetical protein (228 aa)
   
          0.567
slr1122
Hypothetical protein (250 aa)
   
          0.532
ssl0105
Hypothetical protein (88 aa)
   
          0.504
sll1340
Hypothetical protein (100 aa)
   
          0.502
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a "posttransfer" editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner (910 aa)
   
          0.465
rpoF
RNA polymerase sigma-37 (258 aa)
   
          0.456
sll0178
Hypothetical protein (1319 aa)
              0.423
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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