STRINGSTRING
slr0580 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0580" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0580Hypothetical protein (415 aa)    
Predicted Functional Partners:
slr1552
Hypothetical protein (844 aa)
           
  0.824
sll1289
Hypothetical protein (194 aa)
           
  0.824
sll0048
Hypothetical protein (312 aa)
           
  0.823
sll0737
Hypothetical protein (861 aa)
           
  0.823
slr1102
Hypothetical protein (853 aa)
           
  0.823
sll1586
Hypothetical protein (1749 aa)
           
  0.800
slr0882
Hypothetical protein (394 aa)
           
  0.800
sll0503
Hypothetical protein (474 aa)
           
  0.757
sll1247
Hypothetical protein (457 aa)
           
  0.757
slr0320
Hypothetical protein (531 aa)
           
  0.753
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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