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SYNGTS_2556 protein (Synechocystis sp. PCC6803) - STRING interaction network
"SYNGTS_2556" - dTDP-glucose 4,6-dehydratase in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGTS_2556dTDP-glucose 4,6-dehydratase (342 aa)    
Predicted Functional Partners:
SYNGTS_2019
dTDP-4-dehydrorhamnose 3,5-epimerase (182 aa)
 
  0.998
SYNGTS_2253
Glucose-1-phosphate thymidylyltransferase (365 aa)
 
 
  0.997
SYNGTS_0327
dTDP-6-deoxy-L-mannose-dehydrogenase (189 aa)
 
 
  0.994
SYNGTS_0045
dTDP-6-deoxy-L-mannose-dehydrogenase (293 aa)
 
 
  0.991
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
   
 
  0.946
slr0583
Hypothetical protein (310 aa)
   
 
  0.932
slr2111
Hypothetical protein (157 aa)
   
 
  0.826
rfbE
Perosamine synthetase (378 aa)
   
 
  0.818
spsC
Spore coat polysaccharide biosynthesis protein (345 aa)
   
 
  0.816
rfbF
alpha-D-glucose-1-phosphatecytidylyltransferase (256 aa)
   
 
  0.815
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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