STRINGSTRING
slr0842 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0842" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0842Hypothetical protein (404 aa)    
Predicted Functional Partners:
sll0043
CheA like protein Hik18 (1402 aa)
   
 
  0.915
sll1708
NarL subfamily protein Rre17 (226 aa)
   
 
  0.894
glnB
Nitrogen regulatory protein P-II; P-II indirectly controls the transcription of the GS gene (glnA). P-II prevents NR-II-catalyzed conversion of NR-I to NR-I-phosphate, the transcriptional activator of glnA. When P-II is phosphorylated, these events are reversed. In nitrogen-limiting conditions, when the ratio of Gln to 2-ketoglutarate decreases, P- II is phosphorylated which allows the deadenylation of glutamine synthetase (GS), thus activating the enzyme (By similarity) (112 aa)
   
 
  0.882
sll0779
PleD gene product homolog (884 aa)
   
  0.874
slr0510
Hypothetical protein (505 aa)
       
 
  0.863
sll1169
Hypothetical protein (238 aa)
       
 
  0.863
sll0041
Phytochrome-like photoreceptor protein for positive phototaxis (1000 aa)
 
 
  0.838
slr1885
Hypothetical protein (192 aa)
           
  0.830
slr0104
Hypothetical protein (811 aa)
           
  0.829
sll1924
Hypothetical protein (241 aa)
       
 
  0.801
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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