STRINGSTRING
sll0088 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0088" - Hypothetical protein in Synechocystis sp. PCC6803
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0088Hypothetical protein (240 aa)    
Predicted Functional Partners:
csd
NifS protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (420 aa)
   
   
  0.874
slr1417
Hypothetical protein (118 aa)
   
     
  0.850
slr0074
Fe-S assembly protein SufB (480 aa)
         
  0.826
slr0075
ABC transporter subunit Ycf16 (256 aa)
   
   
  0.776
slr1565
Hypothetical protein (113 aa)
           
  0.757
miaB
(dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (451 aa)
           
  0.745
slr1419
Hypothetical protein (159 aa)
           
  0.669
prmA
Ribosomal protein L11 methyltransferase PrmA; Methylates ribosomal protein L11 (300 aa)
         
  0.639
rsmE
Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (By similarity) (303 aa)
         
  0.639
sll1773
Hypothetical protein; Putative quercetin 2,3-dioxygenase (232 aa)
           
  0.630
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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