Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| alr | cysM | gene:10500014 | gene:10497519 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Cysteine synthase; ORF_ID:sll0712. | 0.488 |
| alr | moeB | gene:10500014 | gene:10499314 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Molybdopterin biosynthesis MoeB protein; ORF_ID:sll1536; gene:moeB or chlN. | 0.401 |
| alr | nifS-3 | gene:10500014 | gene:10500049 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | NifS protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.414 |
| cysM | alr | gene:10497519 | gene:10500014 | Cysteine synthase; ORF_ID:sll0712. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.488 |
| cysM | moeB | gene:10497519 | gene:10499314 | Cysteine synthase; ORF_ID:sll0712. | Molybdopterin biosynthesis MoeB protein; ORF_ID:sll1536; gene:moeB or chlN. | 0.486 |
| cysM | nifJ | gene:10497519 | gene:10500278 | Cysteine synthase; ORF_ID:sll0712. | Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | 0.409 |
| cysM | nifS-3 | gene:10497519 | gene:10500049 | Cysteine synthase; ORF_ID:sll0712. | NifS protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.415 |
| moeB | alr | gene:10499314 | gene:10500014 | Molybdopterin biosynthesis MoeB protein; ORF_ID:sll1536; gene:moeB or chlN. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.401 |
| moeB | cysM | gene:10499314 | gene:10497519 | Molybdopterin biosynthesis MoeB protein; ORF_ID:sll1536; gene:moeB or chlN. | Cysteine synthase; ORF_ID:sll0712. | 0.486 |
| moeB | nifJ | gene:10499314 | gene:10500278 | Molybdopterin biosynthesis MoeB protein; ORF_ID:sll1536; gene:moeB or chlN. | Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | 0.556 |
| moeB | nifS | gene:10499314 | gene:10497533 | Molybdopterin biosynthesis MoeB protein; ORF_ID:sll1536; gene:moeB or chlN. | NifS protein; ORF_ID:sll0704. | 0.985 |
| moeB | nifS-3 | gene:10499314 | gene:10500049 | Molybdopterin biosynthesis MoeB protein; ORF_ID:sll1536; gene:moeB or chlN. | NifS protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.663 |
| moeB | slr0600 | gene:10499314 | gene:10500638 | Molybdopterin biosynthesis MoeB protein; ORF_ID:sll1536; gene:moeB or chlN. | ORF_ID:slr0600; unknown protein. | 0.827 |
| nifJ | cysM | gene:10500278 | gene:10497519 | Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | Cysteine synthase; ORF_ID:sll0712. | 0.409 |
| nifJ | moeB | gene:10500278 | gene:10499314 | Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | Molybdopterin biosynthesis MoeB protein; ORF_ID:sll1536; gene:moeB or chlN. | 0.556 |
| nifJ | nifS-3 | gene:10500278 | gene:10500049 | Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | NifS protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.518 |
| nifJ | slr0600 | gene:10500278 | gene:10500638 | Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | ORF_ID:slr0600; unknown protein. | 0.511 |
| nifS | moeB | gene:10497533 | gene:10499314 | NifS protein; ORF_ID:sll0704. | Molybdopterin biosynthesis MoeB protein; ORF_ID:sll1536; gene:moeB or chlN. | 0.985 |
| nifS | nifS-3 | gene:10497533 | gene:10500049 | NifS protein; ORF_ID:sll0704. | NifS protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.418 |
| nifS-3 | alr | gene:10500049 | gene:10500014 | NifS protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.414 |
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