STRINGSTRING
slr0093 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0093" - DnaJ protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0093DnaJ protein (332 aa)    
Predicted Functional Partners:
dnaK2
DnaK protein; Acts as a chaperone (636 aa)
 
  0.979
dnaK3
DnaK protein; Acts as a chaperone (771 aa)
 
  0.975
dnaK1
DnaK protein; Acts as a chaperone (692 aa)
 
  0.973
slr0092
Hypothetical protein (257 aa)
   
   
  0.964
slr0086
Hypothetical protein (531 aa)
 
  0.940
slr0095
O-methyltransferase (220 aa)
         
  0.930
grpE
Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] (249 aa)
   
  0.800
ribF
Bifunctional riboflavin kinase/FMN adenylyltransferase (313 aa)
   
   
  0.785
slr0096
Low affinity sulfate transporter (556 aa)
         
  0.740
glsA
Hypothetical protein (327 aa)
   
   
  0.723
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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