STRINGSTRING
slr0096 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0096" - Low affinity sulfate transporter in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0096Low affinity sulfate transporter (556 aa)    
Predicted Functional Partners:
slr0092
Hypothetical protein (257 aa)
         
  0.888
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (77 aa)
     
 
  0.834
slr1347
Carbonic anhydrase; Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation (311 aa)
 
   
  0.767
slr0095
O-methyltransferase (220 aa)
         
  0.762
slr0498
Hypothetical protein (234 aa)
   
        0.758
slr0093
DnaJ protein (332 aa)
         
  0.740
SYNGTS_2307
Carbonic anhydrase; Reversible hydration of carbon dioxide (263 aa)
 
   
  0.698
cynS
Cyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide (149 aa)
       
  0.637
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle (1034 aa)
     
 
    0.633
nifJ
Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1199 aa)
   
   
  0.426
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (12%) [HD]