STRINGSTRING
slr0498 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0498" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0498Hypothetical protein (234 aa)    
Predicted Functional Partners:
sll0261
Potassium channel (568 aa)
           
  0.926
sll0993
Potassium channel (365 aa)
           
  0.926
ntpJ
Na+ -ATPase subunit J (444 aa)
     
 
  0.808
nhaS3
Na/H+ antiporter; Na(+)/H(+) antiporter that transports sodium from the cytoplasm into the thylakoid lumen in exchange for protons. Contributes to sodium homeostasis and tolerance. Has also Li(+)/H(+) antiport activity under K(+)-free conditions, but not under K(+)-rich conditions (461 aa)
   
   
  0.789
slr0545
Aldo/keto reductase (314 aa)
   
    0.767
slr0096
Low affinity sulfate transporter (556 aa)
   
        0.758
slr1503
Hypothetical protein (330 aa)
     
    0.735
slr1023
Hypothetical protein (104 aa)
   
          0.700
sll0556
Hypothetical protein (631 aa)
     
 
  0.585
nrtA
Nitrate transport 45kD protein; Essential component of the nitrate-transporting system. May be the substrate-binding protein (By similarity) (446 aa)
           
  0.538
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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