STRINGSTRING
sll0485 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0485" - NarL subfamily protein Rre30 in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0485NarL subfamily protein Rre30 (299 aa)    
Predicted Functional Partners:
sll0486
Clock protein KaiB (102 aa)
 
          0.710
slr1942
Circadian clock protein KaiC (505 aa)
 
 
      0.627
sll1265
Hypothetical protein (1978 aa)
   
          0.515
slr1980
Hypothetical protein (297 aa)
   
          0.508
sll0484
ABC transporter (245 aa)
              0.470
rcp1
CheY subfamily protein Rcp1/Rcp/Rre27; Forms a two-component system with cph1 in which it acts as receiver substrate (147 aa)
   
          0.436
slr1958
Hypothetical protein (200 aa)
   
          0.433
slr1805
Sensory transduction histidine kinase Hik16 (749 aa)
   
          0.417
slr1095
Hypothetical protein (215 aa)
   
          0.413
ssr2708
Hypothetical protein (53 aa)
   
          0.412
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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