STRINGSTRING
slr0505 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0505" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0505Hypothetical protein (190 aa)    
Predicted Functional Partners:
slr0503
Hypothetical protein (337 aa)
              0.866
slr0243
Hypothetical protein (175 aa)
   
          0.775
slr1579
Hypothetical protein (562 aa)
   
          0.738
ssr2047
Hypothetical protein (87 aa)
   
          0.734
sll1658
Hypothetical protein (158 aa)
   
          0.734
sll1638
Hypothetical protein (149 aa)
   
          0.671
ssr0349
Hypothetical protein (63 aa)
   
          0.656
sll0691
Hypothetical protein (200 aa)
   
          0.652
cobW
Cobalamin synthesis protein CobW homolog (352 aa)
              0.650
slr0637
Hypothetical protein (261 aa)
   
          0.650
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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