STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiPCobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation (By similarity); Belongs to the CobB/CobQ family. CobQ subfamily. (527 aa)    
Predicted Functional Partners:
cbiH
Precorrin methylase; ORF_ID:slr0969; gene:cbiH or cobJ.
  
 0.998
cbiB
CbiB protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
 0.998
cobA
cob(I)alamin adenosyltransferase; ORF_ID:slr0260; gene:cobA or cobO.
  
 0.997
slr0252
Cobalt-precorrin-6A reductase; Catalyzes the reduction of the macrocycle of cobalt- precorrin-6A to cobalt-precorrin-6B.
 
  
 0.987
cbiC
Precorrin isomerase; Catalyzes the conversion of cobalt-precorrin-8 to cobyrinate. Belongs to the CobH/CbiC family.
  
 0.987
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
  
 0.986
cbiL
S-adenosyl-methionine: precorrin-2 methyltransferase; ORF_ID:slr1879; gene:cbiL or cobI; Belongs to the precorrin methyltransferase family.
 
  
 0.971
cbiF
Precorrin methylase; ORF_ID:slr0239; gene:cbiF or cobM.
 
  
 0.965
cobU
Cobinamide kinase/cobinamide phosphate guanylyltransferase; ORF_ID:slr0216; gene:cobU or cobP.
 
  
 0.964
hisC
Histidinol-phosphate aminotransferase; ORF_ID:sll1713.
  
 0.962
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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