STRINGSTRING
ycf36 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ycf36" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycf36Hypothetical protein (173 aa)    
Predicted Functional Partners:
sll0608
Hypothetical protein (104 aa)
   
        0.781
psbW
Photosystem II 13 kD protein Psb28 (112 aa)
   
        0.777
psaF
Photosystem I subunit III; Probably participates in efficiency of electron transfer from plastocyanin to P700 (or cytochrome c553 in algae and cyanobacteria). This plastocyanin-docking protein contributes to the specific association of plastocyanin to PSI (165 aa)
   
        0.777
slr1195
Hypothetical protein (154 aa)
   
          0.776
psaE
Photosystem I subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase (74 aa)
   
        0.772
slr0565
Hypothetical protein (325 aa)
   
        0.767
slr0948
Hypothetical protein (215 aa)
   
          0.764
slr1918
Hypothetical protein (228 aa)
   
          0.764
thf1
Hypothetical protein; May be involved in photosynthetic membrane biogenesis (240 aa)
   
        0.760
slr1780
Hypothetical protein (133 aa)
   
          0.760
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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