STRINGSTRING
sll0102 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0102" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0102Hypothetical protein (358 aa)    
Predicted Functional Partners:
SYNGTS_2057
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (345 aa)
     
      0.873
rbcX
Possible Rubisco chaperonin (138 aa)
 
        0.784
slr1288
Hypothetical protein (194 aa)
   
        0.781
sll0944
Hypothetical protein (164 aa)
   
          0.778
sll1274
Hypothetical protein (171 aa)
   
          0.778
ccmN
Hypothetical protein (241 aa)
   
          0.778
ssl3364
Hypothetical protein (74 aa)
   
          0.777
sll1751
Hypothetical protein (111 aa)
   
        0.776
sll0072
Hypothetical protein (227 aa)
   
          0.776
sll0364
Hypothetical protein (139 aa)
   
          0.776
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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