STRINGSTRING
slr0109 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0109" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0109Hypothetical protein (318 aa)    
Predicted Functional Partners:
slr0108
Hypothetical protein (418 aa)
              0.875
slr0510
Hypothetical protein (505 aa)
 
   
  0.699
stpA
Glucosylglycerolphosphate phosphatase; Phosphorylates glucosylglycerol-phosphate the precursor of the osmoprotectant glucosylglycerol necessary for salt adaptation of Synechocystis (422 aa)
   
          0.620
slr0639
Hypothetical protein (296 aa)
 
          0.591
sll0218
Hypothetical protein (172 aa)
   
          0.586
sll1040
Hypothetical protein (765 aa)
   
          0.534
rlmN
Hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (350 aa)
              0.531
frp
Hypothetical protein; Destabilizes orange carotenoid protein-R form (OCP-R), the FRP-OCP interaction accelerates the OCP-R to OCP-O conversion (PubMed-20534537, PubMed-23716688). Increases fluorescence recovery following non-photochemical quenching (NPQ) by OCP, most probably by destabilizing OCP-R binding to the phycobilisome core (PubMed-21764991) (134 aa)
   
          0.494
slr0765
Hypothetical protein (617 aa)
   
          0.469
slr1575
Hypothetical protein (479 aa)
   
          0.467
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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