STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0312NarL subfamily; ORF_ID:slr0312. (209 aa)    
Predicted Functional Partners:
slr0311
Sensory transduction histidine kinase; ORF_ID:slr0311.
 
 0.974
slr1759
Hybrid sensory kinase; ORF_ID:slr1759.
 
 
 0.918
slr2104
Hybrid sensory kinase; ORF_ID:slr2104.
 
 
 0.902
sll1905
Hybrid sensory kinase; ORF_ID:sll1905.
  
 
 0.895
sll1220
Potential NAD-reducing hydrogenase subunit; ORF_ID:sll1220.
      
 0.784
ssl0564
Response regulator like protein; ORF_ID:ssl0564.
  
     0.751
ctaE
Cytochrome c oxidase subunit III; ORF_ID:slr1138; Belongs to the cytochrome c oxidase subunit 3 family.
   
  
 0.701
slr1042
CheY subfamily; ORF_ID:slr1042.
   
 
 0.699
sll0043
CheA like protein; ORF_ID:sll0043.
 
 
 0.697
ctaD
Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
   
  
 0.692
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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