STRINGSTRING
slr0799 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0799" - Transposase in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0799Transposase (107 aa)    
Predicted Functional Partners:
slr0800
Transposase (142 aa)
     
  0.997
sll1792
Transposase (142 aa)
          0.759
sll0789
OmpR subfamily protein Rre34/CopR (232 aa)
         
  0.759
slr1143
Hypothetical protein (343 aa)
           
  0.753
slr1042
CheY subfamily protein PilH/TaxY3/Rre7 (121 aa)
           
  0.753
slr1246
Transposase (178 aa)
 
          0.737
sll0649
OmpR subfamily protein Rre3 (245 aa)
           
  0.718
sll0039
CheY subfamily protein PixH/PisH/Rre35 (119 aa)
           
  0.712
sll0779
PleD gene product homolog (884 aa)
           
  0.712
sll0790
Sensory transduction histidine kinase Hik31 (458 aa)
         
  0.707
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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