STRINGSTRING
spkD protein (Synechocystis sp. PCC6803) - STRING interaction network
"spkD" - Eukaryotic protein kinase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spkDEukaryotic protein kinase (505 aa)    
Predicted Functional Partners:
sll0778
ABC transporter (790 aa)
 
 
  0.983
sll1771
Hypothetical protein (254 aa)
  0.976
sll1033
Hypothetical protein (668 aa)
 
  0.975
sll0602
Hypothetical protein (691 aa)
 
  0.973
sll0777
Hypothetical protein (305 aa)
         
  0.951
ank
Erythroid ankyrin (441 aa)
   
  0.910
sll1387
Hypothetical protein (254 aa)
   
  0.887
sll0775
Hypothetical protein (125 aa)
         
  0.872
htpG
Heat shock protein; Molecular chaperone. Has ATPase activity (658 aa)
       
  0.851
sll1864
Chloride channel protein (899 aa)
     
  0.829
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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