STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknA-4Eukaryotic protein kinase; ORF_ID:sll0776; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (505 aa)    
Predicted Functional Partners:
sll0778
ABC transporter; ORF_ID:sll0778.
 
 
 0.949
sll0777
ORF_ID:sll0777; unknown protein.
     
 0.938
sll1574
ORF_ID:sll1574; unknown protein.
  
  
 0.918
sll1033
ORF_ID:sll1033; unknown protein.
 
 
 0.882
sll0775
ORF_ID:sll0775; unknown protein.
     
 0.872
sll1771
ORF_ID:sll1771; hypothetical protein.
 
 
 0.867
sll0602
ORF_ID:sll0602; unknown protein.
 
 
 0.853
mom72
Mitochondrial outer membrane 72K protein; ORF_ID:sll1667.
 
  
 0.842
bgl
Beta-glucosidase; ORF_ID:sll1538.
  
  
 0.717
sll0754
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
  
  
 0.591
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.