STRINGSTRING
slr0700 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0700" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0700Hypothetical protein (452 aa)    
Predicted Functional Partners:
sll0606
Hypothetical protein (476 aa)
   
 
  0.949
sll0484
ABC transporter (245 aa)
   
   
  0.943
slr0468
Hypothetical protein (436 aa)
           
  0.940
slr0075
ABC transporter subunit Ycf16 (256 aa)
         
  0.924
natB
Periplasmic binding protein of ABC transporter for natural amino acids (454 aa)
           
  0.920
sll0064
Hypothetical protein (275 aa)
           
  0.903
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (348 aa)
       
      0.815
sll1634
Hypothetical protein (349 aa)
       
      0.815
nplT
Neopullulanase (508 aa)
   
  0.715
lysC
Aspartate kinase (600 aa)
     
 
  0.655
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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