STRINGSTRING
sll0012 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0012" - Transposase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0012Transposase (261 aa)    
Predicted Functional Partners:
slr0230
Transposase (282 aa)
         
  0.967
slr2037
Hypothetical protein (300 aa)
           
  0.940
sll1770
ABC1-like (585 aa)
           
  0.923
sll0602
Hypothetical protein (691 aa)
           
  0.906
rpsU
30S ribosomal protein S21 (60 aa)
           
  0.820
mutS2
DNA mismatch repair protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity (822 aa)
           
  0.778
sll1365
Hypothetical protein (633 aa)
           
  0.759
slr0114
Hypothetical protein (510 aa)
           
  0.759
slr1983
Regulatory component of sensory transduction system Rre22 (603 aa)
           
  0.759
sll1387
Hypothetical protein (254 aa)
           
  0.756
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (9%) [HD]