STRINGSTRING
ycf35 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ycf35" - Conserved hypothetical protein Ycf35 in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycf35Conserved hypothetical protein Ycf35 (128 aa)    
Predicted Functional Partners:
sll0662
Bacterial type ferredoxin family protein (133 aa)
 
          0.970
ssl1263
Hypothetical protein (80 aa)
 
          0.930
ycf33
Conserved hypothetical protein Ycf33 (66 aa)
   
     
  0.905
ycf46
Hypothetical protein (499 aa)
 
     
  0.868
ycf34
Conserved hypothetical protein Ycf34 (82 aa)
   
     
  0.803
slr1915
Hypothetical protein (104 aa)
   
     
  0.786
sll1961
Hypothetical protein (388 aa)
   
          0.746
slr1122
Hypothetical protein (250 aa)
   
          0.745
sll0822
Hypothetical protein (129 aa)
   
          0.744
slr1896
Hypothetical protein (130 aa)
   
          0.743
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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