Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
sll0038 | sll0039 | gene:10500294 | gene:10500293 | PatA subfamily; ORF_ID:sll0038. | CheY subfamily; ORF_ID:sll0039. | 0.730 |
sll0038 | sll0040 | gene:10500294 | gene:10500292 | PatA subfamily; ORF_ID:sll0038. | ORF_ID:sll0040; unknown protein. | 0.999 |
sll0038 | sll0041 | gene:10500294 | gene:10500291 | PatA subfamily; ORF_ID:sll0038. | ORF_ID:sll0041; Belongs to the phytochrome family. | 0.996 |
sll0038 | sll0043 | gene:10500294 | gene:10500289 | PatA subfamily; ORF_ID:sll0038. | CheA like protein; ORF_ID:sll0043. | 0.982 |
sll0038 | sll1296 | gene:10500294 | gene:10498061 | PatA subfamily; ORF_ID:sll0038. | CheA like protein; ORF_ID:sll1296. | 0.626 |
sll0038 | sll1905 | gene:10500294 | gene:10498754 | PatA subfamily; ORF_ID:sll0038. | Hybrid sensory kinase; ORF_ID:sll1905. | 0.973 |
sll0038 | slr0073 | gene:10500294 | gene:10500044 | PatA subfamily; ORF_ID:sll0038. | Sensory transduction histidine kinase; ORF_ID:slr0073. | 0.699 |
sll0038 | slr0322 | gene:10500294 | gene:10499514 | PatA subfamily; ORF_ID:sll0038. | CheA like protein; ORF_ID:slr0322. | 0.596 |
sll0039 | sll0038 | gene:10500293 | gene:10500294 | CheY subfamily; ORF_ID:sll0039. | PatA subfamily; ORF_ID:sll0038. | 0.730 |
sll0039 | sll0040 | gene:10500293 | gene:10500292 | CheY subfamily; ORF_ID:sll0039. | ORF_ID:sll0040; unknown protein. | 0.996 |
sll0039 | sll0041 | gene:10500293 | gene:10500291 | CheY subfamily; ORF_ID:sll0039. | ORF_ID:sll0041; Belongs to the phytochrome family. | 0.989 |
sll0039 | sll0043 | gene:10500293 | gene:10500289 | CheY subfamily; ORF_ID:sll0039. | CheA like protein; ORF_ID:sll0043. | 0.975 |
sll0039 | sll1296 | gene:10500293 | gene:10498061 | CheY subfamily; ORF_ID:sll0039. | CheA like protein; ORF_ID:sll1296. | 0.668 |
sll0039 | sll1905 | gene:10500293 | gene:10498754 | CheY subfamily; ORF_ID:sll0039. | Hybrid sensory kinase; ORF_ID:sll1905. | 0.906 |
sll0039 | slr0322 | gene:10500293 | gene:10499514 | CheY subfamily; ORF_ID:sll0039. | CheA like protein; ORF_ID:slr0322. | 0.433 |
sll0040 | sll0038 | gene:10500292 | gene:10500294 | ORF_ID:sll0040; unknown protein. | PatA subfamily; ORF_ID:sll0038. | 0.999 |
sll0040 | sll0039 | gene:10500292 | gene:10500293 | ORF_ID:sll0040; unknown protein. | CheY subfamily; ORF_ID:sll0039. | 0.996 |
sll0040 | sll0041 | gene:10500292 | gene:10500291 | ORF_ID:sll0040; unknown protein. | ORF_ID:sll0041; Belongs to the phytochrome family. | 0.998 |
sll0040 | sll0043 | gene:10500292 | gene:10500289 | ORF_ID:sll0040; unknown protein. | CheA like protein; ORF_ID:sll0043. | 0.999 |
sll0040 | sll1296 | gene:10500292 | gene:10498061 | ORF_ID:sll0040; unknown protein. | CheA like protein; ORF_ID:sll1296. | 0.981 |
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